DeepNeo-CLv4.1

Predict MHC-I peptide binding & presentation

The older DeepNeo-CL v4.1 predictor.

Superseded by v4.2: the current model of record is DeepNeo-CL v4.2 at /v42/ on this domain — it beats NetMHCpan-4.2 on 12/12 supported alleles. This page stays live so both models can be queried side-by-side.

Predict a peptide + HLA

Paste an 8–14mer peptide (20 standard AAs) and a supported HLA-I allele. Output: binding-affinity (BA) and presentation (EL) probabilities. Threshold 0.5 for the binary label.

Compare against v4.2: The v4.2 model beats NetMHCpan-4.2 on 12 / 12 alleles with p ≈ 0. Interactive charts + benchmark methodology on the v4.2 pages.
Open v4.2 dashboard →